STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000013258Uncharacterized protein. (575 aa)    
Predicted Functional Partners:
MSL3
MSL complex subunit 3.
    
 0.858
ENSPMEP00000031131
VWFD domain-containing protein.
 
 
0.845
NCSTN
Nicastrin.
    
 0.775
LOC106912422
MSL complex subunit 2.
    
 0.764
LOC106933876
RING-type domain-containing protein.
    
 0.764
nxf1
Zgc:153681.
    
 0.753
LOC106918185
Protein S100; Belongs to the S-100 family.
    
 0.752
ENSPMEP00000028242
VWFD domain-containing protein.
 
     
0.740
LOC106931947
Recombination signal binding protein for immunoglobulin kappa J region-like.
   
 0.711
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.704
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.