STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000013758Uncharacterized protein. (324 aa)    
Predicted Functional Partners:
LOC106929544
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
 0.661
LOC106931146
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
    
  0.645
LOC106904706
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
  0.645
abl2
Tyrosine-protein kinase.
   
 0.620
abl1
Tyrosine-protein kinase.
   
 0.620
nck1
Cytoplasmic protein.
    
 0.599
nck2
Cytoplasmic protein.
    
 0.599
lrtm2
Leucine-rich repeats and transmembrane domains 2a.
   
 0.541
LOC106904435
Slit homolog 1b (Drosophila).
   
 0.541
slit1
Slit homolog 1a (Drosophila).
   
 0.541
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: low (12%) [HD]