STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000013866Uncharacterized protein. (106 aa)    
Predicted Functional Partners:
cbfb
Core-binding factor subunit beta.
    
 0.607
LOC106908775
Core-binding factor subunit beta.
    
 0.607
LOC106927107
Runt-related transcription factor.
    
 0.592
ENSPMEP00000003502
RunxI domain-containing protein.
    
 0.592
LOC106918207
Runt-related transcription factor.
    
 0.592
LOC106911578
Runt domain-containing protein.
    
 0.592
LOC106904665
Runt domain-containing protein.
    
 0.592
rorb
RAR-related orphan receptor B.
    
 0.509
LOC106922384
RAR-related orphan receptor C a.
    
 0.494
LOC106927583
Uncharacterized protein.
    
 0.494
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.