ush1g protein (Poecilia mexicana) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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Experiments

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[Homology]

Score

ush1g

Usher syndrome 1Gb (autosomal recessive). (477 aa)

Predicted Functional Partners:

ush1c

0.942

myo7a

0.710

ENSPMEP00000026666

0.710

ENSPMEP00000002011

0.674

myo10

0.674

ENSPMEP00000006473

0.674

LOC106908454

0.674

myo15a

0.674

LOC106923934

0.674

LOC106928299

0.674

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMEP00000002011	ush1c	ENSPMEP00000002011	ENSPMEP00000012419	MyTH4 domain-containing protein.	Usher syndrome 1C.	0.713
ENSPMEP00000002011	ush1g	ENSPMEP00000002011	ENSPMEP00000013883	MyTH4 domain-containing protein.	Usher syndrome 1Gb (autosomal recessive).	0.674
ENSPMEP00000006473	ush1c	ENSPMEP00000006473	ENSPMEP00000012419	Uncharacterized protein.	Usher syndrome 1C.	0.713
ENSPMEP00000006473	ush1g	ENSPMEP00000006473	ENSPMEP00000013883	Uncharacterized protein.	Usher syndrome 1Gb (autosomal recessive).	0.674
ENSPMEP00000026666	ush1c	ENSPMEP00000026666	ENSPMEP00000012419	Uncharacterized protein.	Usher syndrome 1C.	0.770
ENSPMEP00000026666	ush1g	ENSPMEP00000026666	ENSPMEP00000013883	Uncharacterized protein.	Usher syndrome 1Gb (autosomal recessive).	0.710
LOC106908454	ush1c	ENSPMEP00000016700	ENSPMEP00000012419	Si:ch73-194h10.2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Usher syndrome 1C.	0.713
LOC106908454	ush1g	ENSPMEP00000016700	ENSPMEP00000013883	Si:ch73-194h10.2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Usher syndrome 1Gb (autosomal recessive).	0.674
LOC106923934	ush1c	ENSPMEP00000018785	ENSPMEP00000012419	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Usher syndrome 1C.	0.713
LOC106923934	ush1g	ENSPMEP00000018785	ENSPMEP00000013883	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Usher syndrome 1Gb (autosomal recessive).	0.674
LOC106928299	ush1c	ENSPMEP00000021100	ENSPMEP00000012419	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Usher syndrome 1C.	0.713
LOC106928299	ush1g	ENSPMEP00000021100	ENSPMEP00000013883	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Usher syndrome 1Gb (autosomal recessive).	0.674
myo10	ush1c	ENSPMEP00000005612	ENSPMEP00000012419	Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Usher syndrome 1C.	0.713
myo10	ush1g	ENSPMEP00000005612	ENSPMEP00000013883	Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Usher syndrome 1Gb (autosomal recessive).	0.674
myo15a	ush1c	ENSPMEP00000017770	ENSPMEP00000012419	Myosin XVAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Usher syndrome 1C.	0.713
myo15a	ush1g	ENSPMEP00000017770	ENSPMEP00000013883	Myosin XVAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Usher syndrome 1Gb (autosomal recessive).	0.674
myo7a	ush1c	ENSPMEP00000019435	ENSPMEP00000012419	Myosin VIIAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Usher syndrome 1C.	0.770
myo7a	ush1g	ENSPMEP00000019435	ENSPMEP00000013883	Myosin VIIAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Usher syndrome 1Gb (autosomal recessive).	0.710
ush1c	ENSPMEP00000002011	ENSPMEP00000012419	ENSPMEP00000002011	Usher syndrome 1C.	MyTH4 domain-containing protein.	0.713
ush1c	ENSPMEP00000006473	ENSPMEP00000012419	ENSPMEP00000006473	Usher syndrome 1C.	Uncharacterized protein.	0.713