STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf618Zinc finger protein 618. (931 aa)    
Predicted Functional Partners:
slitrk6
SLIT and NTRK-like family, member 6.
      
 0.538
LOC106916555
Microfibril associated protein 5.
      
 0.523
phf14
PHD finger protein 14.
      
 0.477
chd2
Chromodomain helicase DNA binding protein 2.
    
 0.451
ENSPMEP00000019853
Uncharacterized protein.
    
 0.451
ENSPMEP00000021945
Uncharacterized protein.
    
 0.451
pla1a
Phospholipase A1 member A.
    
 
 0.428
kctd2
Potassium channel tetramerization domain containing 2.
    
  0.416
ube2i
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.416
LOC106906894
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.416
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.