STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000015139WD_REPEATS_REGION domain-containing protein. (172 aa)    
Predicted Functional Partners:
ENSPMEP00000016872
Uncharacterized protein.
    
 0.842
ranbp2
RAN binding protein 2.
    
 0.665
wdr61
WD repeat domain 61.
  
 
  0.629
LOC106909814
WD repeat, sterile alpha motif and U-box domain containing 1.
  
 
  0.607
sec13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
  
 
 0.607
wdsub1
WD repeat, sterile alpha motif and U-box domain containing 1.
  
 
  0.606
ENSPMEP00000012258
Uncharacterized protein.
    
  0.589
ENSPMEP00000028971
Uncharacterized protein.
    
  0.589
ENSPMEP00000014077
Uncharacterized protein.
    
 0.577
LOC106916117
Uncharacterized protein.
    
  0.575
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.