Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC106920007 | OGDH | ENSPMEP00000015880 | ENSPMEP00000017319 | Uncharacterized protein. | Oxoglutarate dehydrogenase. | 0.996 |
LOC106920007 | bckdha | ENSPMEP00000015880 | ENSPMEP00000006376 | Uncharacterized protein. | 2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.981 |
LOC106920007 | bckdhb | ENSPMEP00000015880 | ENSPMEP00000013430 | Uncharacterized protein. | Branched chain keto acid dehydrogenase E1 subunit beta. | 0.981 |
LOC106920007 | dhtkd1 | ENSPMEP00000015880 | ENSPMEP00000005716 | Uncharacterized protein. | Dehydrogenase E1 and transketolase domain containing 1. | 0.993 |
LOC106920007 | dld | ENSPMEP00000015880 | ENSPMEP00000009428 | Uncharacterized protein. | Dihydrolipoyl dehydrogenase. | 0.998 |
LOC106920007 | ogdh | ENSPMEP00000015880 | ENSPMEP00000002970 | Uncharacterized protein. | Oxoglutarate (alpha-ketoglutarate) dehydrogenase b (lipoamide). | 0.996 |
LOC106920007 | pdhb | ENSPMEP00000015880 | ENSPMEP00000032292 | Uncharacterized protein. | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.984 |
LOC106920007 | sucla2 | ENSPMEP00000015880 | ENSPMEP00000013616 | Uncharacterized protein. | Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; ATP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.980 |
LOC106920007 | suclg1 | ENSPMEP00000015880 | ENSPMEP00000003889 | Uncharacterized protein. | Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits. | 0.977 |
LOC106920007 | suclg2 | ENSPMEP00000015880 | ENSPMEP00000010670 | Uncharacterized protein. | Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial; GTP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.973 |
OGDH | LOC106920007 | ENSPMEP00000017319 | ENSPMEP00000015880 | Oxoglutarate dehydrogenase. | Uncharacterized protein. | 0.996 |
OGDH | bckdha | ENSPMEP00000017319 | ENSPMEP00000006376 | Oxoglutarate dehydrogenase. | 2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.822 |
OGDH | bckdhb | ENSPMEP00000017319 | ENSPMEP00000013430 | Oxoglutarate dehydrogenase. | Branched chain keto acid dehydrogenase E1 subunit beta. | 0.849 |
OGDH | dhtkd1 | ENSPMEP00000017319 | ENSPMEP00000005716 | Oxoglutarate dehydrogenase. | Dehydrogenase E1 and transketolase domain containing 1. | 0.667 |
OGDH | dld | ENSPMEP00000017319 | ENSPMEP00000009428 | Oxoglutarate dehydrogenase. | Dihydrolipoyl dehydrogenase. | 0.995 |
OGDH | ogdh | ENSPMEP00000017319 | ENSPMEP00000002970 | Oxoglutarate dehydrogenase. | Oxoglutarate (alpha-ketoglutarate) dehydrogenase b (lipoamide). | 0.900 |
OGDH | pdhb | ENSPMEP00000017319 | ENSPMEP00000032292 | Oxoglutarate dehydrogenase. | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.897 |
OGDH | sucla2 | ENSPMEP00000017319 | ENSPMEP00000013616 | Oxoglutarate dehydrogenase. | Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; ATP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.974 |
OGDH | suclg1 | ENSPMEP00000017319 | ENSPMEP00000003889 | Oxoglutarate dehydrogenase. | Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits. | 0.991 |
OGDH | suclg2 | ENSPMEP00000017319 | ENSPMEP00000010670 | Oxoglutarate dehydrogenase. | Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial; GTP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.957 |
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