STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNIP1Smad nuclear interacting protein 1. (364 aa)    
Predicted Functional Partners:
bud13
BUD13 homolog.
   
 0.994
snw1
SNW domain containing 1.
    
 
 0.989
rbmx2
RNA binding motif protein X-linked 2.
   
 0.980
ENSPMEP00000034198
Uncharacterized protein.
   
 0.980
sf3b1
Splicing factor 3b, subunit 1.
    
 
 0.977
cwc22
CWC22 spliceosome associated protein homolog.
   
 
 0.971
phf5a
PHD finger protein 5A.
    
 
 0.966
cwc27
CWC27 spliceosome associated cyclophilin.
    
 0.962
sf3a3
Splicing factor 3a, subunit 3.
   
 
 0.960
dhx16
DEAH (Asp-Glu-Ala-His) box polypeptide 16.
    
 0.957
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.