STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106905528Si:dkey-6i22.5. (223 aa)    
Predicted Functional Partners:
LOC106915636
DSN1 component of MIS12 kinetochore complex.
    
 0.988
LOC106914532
NSL1 component of MIS12 kinetochore complex.
    
 0.978
spc24
SPC24 component of NDC80 kinetochore complex.
   
 0.952
LOC106907514
Uncharacterized protein.
    
 0.943
LOC106924160
MIS12 kinetochore complex component.
    
 0.943
nuf2
UF2 component of NDC80 kinetochore complex.
    
 0.925
LOC106907617
Uncharacterized protein.
    
 
 0.872
ENSPMEP00000021364
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.848
ndc80
NDC80 kinetochore complex component.
    
 0.839
spc25
SPC25 component of NDC80 kinetochore complex.
    
  0.834
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.