STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106925194Uncharacterized protein. (234 aa)    
Predicted Functional Partners:
etfb
Electron transfer flavoprotein subunit beta.
     
 0.639
eef2kmt
Eukaryotic elongation factor 2 lysine methyltransferase.
   
 
 0.542
hexb
Beta-hexosaminidase.
    
  0.520
LOC106927151
Beta-hexosaminidase.
    
  0.520
fam149b1
Family with sequence similarity 149 member B1.
    
  0.520
LOC106924069
FATP synthase c subunit lysine N-methyltransferase.
    
 
 0.518
gfpt1
Glutamine--fructose-6-phosphate transaminase 1.
     
 0.514
LOC106920876
Glutamine-fructose-6-phosphate transaminase 2.
     
 0.514
LOC106932317
Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.
   
 
  0.485
LOC106933862
Fructose-bisphosphatase 1; Belongs to the FBPase class 1 family.
   
 
  0.485
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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