LOC106921809 protein (Poecilia mexicana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC106921809

Uncharacterized protein. (203 aa)

Predicted Functional Partners:

ENSPMEP00000024343

0.932

LOC106933042

0.868

CDC42

0.868

LOC106931696

0.814

LOC106903887

0.814

LOC106918068

0.814

LOC106925151

0.814

LOC106926573

0.814

LOC106931768

0.814

LOC106905410

0.814

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ENSPMEP00000024343	ENSPMEP00000021112	ENSPMEP00000024343	Cell division cycle 42.	Nerve growth factor receptor a (TNFR superfamily, member 16).	0.691
CDC42	LOC106903887	ENSPMEP00000021112	ENSPMEP00000008213	Cell division cycle 42.	Uncharacterized protein.	0.690
CDC42	LOC106905410	ENSPMEP00000021112	ENSPMEP00000021866	Cell division cycle 42.	Uncharacterized protein.	0.696
CDC42	LOC106918068	ENSPMEP00000021112	ENSPMEP00000014903	Cell division cycle 42.	Uncharacterized protein.	0.689
CDC42	LOC106921809	ENSPMEP00000021112	ENSPMEP00000020005	Cell division cycle 42.	Uncharacterized protein.	0.868
CDC42	LOC106925151	ENSPMEP00000021112	ENSPMEP00000015137	Cell division cycle 42.	Uncharacterized protein.	0.690
CDC42	LOC106926573	ENSPMEP00000021112	ENSPMEP00000018790	Cell division cycle 42.	Uncharacterized protein.	0.690
CDC42	LOC106931696	ENSPMEP00000021112	ENSPMEP00000003882	Cell division cycle 42.	Uncharacterized protein.	0.691
CDC42	LOC106931768	ENSPMEP00000021112	ENSPMEP00000019477	Cell division cycle 42.	Ras homolog family member Ca.	0.690
ENSPMEP00000024343	CDC42	ENSPMEP00000024343	ENSPMEP00000021112	Nerve growth factor receptor a (TNFR superfamily, member 16).	Cell division cycle 42.	0.691
ENSPMEP00000024343	LOC106903887	ENSPMEP00000024343	ENSPMEP00000008213	Nerve growth factor receptor a (TNFR superfamily, member 16).	Uncharacterized protein.	0.582
ENSPMEP00000024343	LOC106905410	ENSPMEP00000024343	ENSPMEP00000021866	Nerve growth factor receptor a (TNFR superfamily, member 16).	Uncharacterized protein.	0.582
ENSPMEP00000024343	LOC106918068	ENSPMEP00000024343	ENSPMEP00000014903	Nerve growth factor receptor a (TNFR superfamily, member 16).	Uncharacterized protein.	0.582
ENSPMEP00000024343	LOC106921809	ENSPMEP00000024343	ENSPMEP00000020005	Nerve growth factor receptor a (TNFR superfamily, member 16).	Uncharacterized protein.	0.932
ENSPMEP00000024343	LOC106925151	ENSPMEP00000024343	ENSPMEP00000015137	Nerve growth factor receptor a (TNFR superfamily, member 16).	Uncharacterized protein.	0.582
ENSPMEP00000024343	LOC106926573	ENSPMEP00000024343	ENSPMEP00000018790	Nerve growth factor receptor a (TNFR superfamily, member 16).	Uncharacterized protein.	0.582
ENSPMEP00000024343	LOC106931696	ENSPMEP00000024343	ENSPMEP00000003882	Nerve growth factor receptor a (TNFR superfamily, member 16).	Uncharacterized protein.	0.582
ENSPMEP00000024343	LOC106931768	ENSPMEP00000024343	ENSPMEP00000019477	Nerve growth factor receptor a (TNFR superfamily, member 16).	Ras homolog family member Ca.	0.582
ENSPMEP00000024343	LOC106933042	ENSPMEP00000024343	ENSPMEP00000001016	Nerve growth factor receptor a (TNFR superfamily, member 16).	Cell division cycle 42.	0.691
LOC106903887	CDC42	ENSPMEP00000008213	ENSPMEP00000021112	Uncharacterized protein.	Cell division cycle 42.	0.690