STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106903298GON domain-containing protein. (695 aa)    
Predicted Functional Partners:
LOC106907901
Peptidase M12B domain-containing protein.
 
     0.834
ADAMTS5
ADAM metallopeptidase with thrombospondin type 1 motif 5.
 
   
  0.497
ENSPMEP00000026711
Myosin VIIAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.493
gba
Glucosylceramidase.
   
 
  0.477
tmem130
PKD domain-containing protein.
   
 
  0.477
LOC106915541
Beta 3-glucosyltransferase.
    
 0.415
ENSPMEP00000021458
Beta 3-glucosyltransferase a.
    
 0.415
LOC106925567
Somatolactin alpha.
      
 0.406
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.