Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPMEP00000000741 | ENSPMEP00000002318 | ENSPMEP00000000741 | ENSPMEP00000002318 | WD_REPEATS_REGION domain-containing protein. | Small nuclear ribonucleoprotein polypeptide F. | 0.953 |
ENSPMEP00000000741 | LOC106933611 | ENSPMEP00000000741 | ENSPMEP00000022831 | WD_REPEATS_REGION domain-containing protein. | Si:ch1073-157b13.1. | 0.550 |
ENSPMEP00000000741 | SNRPN | ENSPMEP00000000741 | ENSPMEP00000017808 | WD_REPEATS_REGION domain-containing protein. | Small nuclear ribonucleoprotein-associated protein. | 0.869 |
ENSPMEP00000000741 | mettl16 | ENSPMEP00000000741 | ENSPMEP00000012473 | WD_REPEATS_REGION domain-containing protein. | U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...] | 0.561 |
ENSPMEP00000000741 | prpf3 | ENSPMEP00000000741 | ENSPMEP00000034356 | WD_REPEATS_REGION domain-containing protein. | PRP3 pre-mRNA processing factor 3 homolog (yeast). | 0.994 |
ENSPMEP00000000741 | prpf31 | ENSPMEP00000000741 | ENSPMEP00000030904 | WD_REPEATS_REGION domain-containing protein. | PRP31 pre-mRNA processing factor 31 homolog (yeast). | 0.978 |
ENSPMEP00000000741 | sart3 | ENSPMEP00000000741 | ENSPMEP00000018445 | WD_REPEATS_REGION domain-containing protein. | Spliceosome associated factor 3, U4/U6 recycling protein. | 0.806 |
ENSPMEP00000002318 | ENSPMEP00000000741 | ENSPMEP00000002318 | ENSPMEP00000000741 | Small nuclear ribonucleoprotein polypeptide F. | WD_REPEATS_REGION domain-containing protein. | 0.953 |
ENSPMEP00000002318 | LOC106933611 | ENSPMEP00000002318 | ENSPMEP00000022831 | Small nuclear ribonucleoprotein polypeptide F. | Si:ch1073-157b13.1. | 0.576 |
ENSPMEP00000002318 | SNRPN | ENSPMEP00000002318 | ENSPMEP00000017808 | Small nuclear ribonucleoprotein polypeptide F. | Small nuclear ribonucleoprotein-associated protein. | 0.997 |
ENSPMEP00000002318 | larp7 | ENSPMEP00000002318 | ENSPMEP00000005781 | Small nuclear ribonucleoprotein polypeptide F. | La ribonucleoprotein domain family, member 7. | 0.646 |
ENSPMEP00000002318 | prpf3 | ENSPMEP00000002318 | ENSPMEP00000034356 | Small nuclear ribonucleoprotein polypeptide F. | PRP3 pre-mRNA processing factor 3 homolog (yeast). | 0.976 |
ENSPMEP00000002318 | prpf31 | ENSPMEP00000002318 | ENSPMEP00000030904 | Small nuclear ribonucleoprotein polypeptide F. | PRP31 pre-mRNA processing factor 31 homolog (yeast). | 0.991 |
ENSPMEP00000002318 | sart3 | ENSPMEP00000002318 | ENSPMEP00000018445 | Small nuclear ribonucleoprotein polypeptide F. | Spliceosome associated factor 3, U4/U6 recycling protein. | 0.407 |
LOC106928503 | LOC106933611 | ENSPMEP00000016419 | ENSPMEP00000022831 | HEXIM P-TEFb complex subunit 1. | Si:ch1073-157b13.1. | 0.769 |
LOC106928503 | cdk9 | ENSPMEP00000016419 | ENSPMEP00000017427 | HEXIM P-TEFb complex subunit 1. | Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. | 0.944 |
LOC106928503 | larp7 | ENSPMEP00000016419 | ENSPMEP00000005781 | HEXIM P-TEFb complex subunit 1. | La ribonucleoprotein domain family, member 7. | 0.896 |
LOC106928503 | sart3 | ENSPMEP00000016419 | ENSPMEP00000018445 | HEXIM P-TEFb complex subunit 1. | Spliceosome associated factor 3, U4/U6 recycling protein. | 0.435 |
LOC106933611 | ENSPMEP00000000741 | ENSPMEP00000022831 | ENSPMEP00000000741 | Si:ch1073-157b13.1. | WD_REPEATS_REGION domain-containing protein. | 0.550 |
LOC106933611 | ENSPMEP00000002318 | ENSPMEP00000022831 | ENSPMEP00000002318 | Si:ch1073-157b13.1. | Small nuclear ribonucleoprotein polypeptide F. | 0.576 |
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