STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnf14RBR-type E3 ubiquitin transferase. (482 aa)    
Predicted Functional Partners:
ar
Uncharacterized protein.
    
 
 0.760
LOC106903221
Androgen receptor beta.
    
 
 0.760
crebrf
Creb3 regulatory factor.
    
 
 0.582
atp5po
ATP synthase peripheral stalk subunit OSCP.
    
   0.520
ENSPMEP00000025153
Uncharacterized protein.
    
 
 0.508
etf1
Eukaryotic translation termination factor 1b.
    
 
 0.500
rnf216
Ring finger protein 216.
     
0.498
ube2l3
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.454
ENSPMEP00000024121
Ubiquitin-conjugating enzyme E2L 3b; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.454
rnf217
RBR-type E3 ubiquitin transferase.
     
0.451
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.