STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106928861Uncharacterized protein. (616 aa)    
Predicted Functional Partners:
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.895
igf2r
Insulin-like growth factor 2 receptor.
    
 
 0.846
gga3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.
  
0.841
rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
    
 0.797
LOC106928542
Uncharacterized protein.
    
 0.797
LOC106917741
RAB guanine nucleotide exchange factor (GEF) 1, like.
    
 0.797
rabep2
Rabaptin, RAB GTPase binding effector protein 2.
    
 0.767
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
  
  
 
0.707
ENSPMEP00000007649
VHS domain-containing protein.
   
0.698
ENSPMEP00000007597
Uncharacterized protein.
  
  
 
0.669
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.