STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xbp1X-box binding protein 1. (263 aa)    
Predicted Functional Partners:
ddit3
DNA-damage-inducible transcript 3.
   
 0.984
ern2
Endoplasmic reticulum to nucleus signaling 1.
    
 0.980
LOC106906027
Uncharacterized protein.
    
 0.925
LOC106912186
Uncharacterized protein.
    
 0.925
LOC106923778
Serine/threonine-protein kinase/endoribonuclease IRE1-like.
    
 0.925
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.925
atf6
Activating transcription factor 6.
    
 0.863
atf6b
BZIP domain-containing protein.
    
 0.834
rpl8
Ribosomal protein L8.
    
  0.810
sec61b
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 
 0.802
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.