STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106929524DAZ interacting zinc finger protein 1. (891 aa)    
Predicted Functional Partners:
fam92a
Family with sequence similarity 92 member A1.
    
 0.640
gak
Cyclin G associated kinase.
   
 0.620
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.606
ubxn7
UBX domain protein 7.
    
 0.586
traf7
TNF receptor-associated factor 7.
    
  0.579
ENSPMEP00000030266
Uncharacterized protein.
   
  0.571
pla2g4a
Phospholipase A2.
    
 0.570
wdr90
WD repeat domain 90.
    
 0.567
fan1
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
      
 0.564
ENSPMEP00000018093
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
  0.561
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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