STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PM20D2Peptidase M20 domain-containing protein 2; Belongs to the peptidase M20A family. (405 aa)    
Predicted Functional Partners:
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.742
LOC106924521
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.742
ENSPMEP00000014332
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
   
  0.695
tk1
Thymidine kinase.
    
 0.640
allc
Allantoicase.
   
 
 0.634
LOC106919852
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.613
LOC106912337
Malate synthase-like.
   
 
 0.605
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
 0.596
ephx2
Epoxide hydrolase 2, cytoplasmic.
    
 0.593
tyms
Thymidylate synthetase.
    
  0.591
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.