STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
onecut2One cut domain family member. (424 aa)    
Predicted Functional Partners:
orc3
Origin recognition complex, subunit 3.
    
 
 0.626
LOC106925540
Cyclin G2; Belongs to the cyclin family.
    
 
 0.604
CCNG2
Cyclin G2; Belongs to the cyclin family.
    
 
 0.600
PPEF2
Serine/threonine-protein phosphatase with EF-hands.
   
  
 0.587
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
      
 0.581
WDR7
WD repeat domain 7.
      
 0.566
LOC106921969
Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.
      
 0.553
rpl32
Ribosomal protein L32.
      
 0.544
LOC106927328
ANK_REP_REGION domain-containing protein.
    
 
 0.537
syk
Tyrosine-protein kinase.
      
 0.527
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.