Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPMEP00000005476 | ENSPMEP00000018093 | ENSPMEP00000005476 | ENSPMEP00000018093 | Mindbomb E3 ubiquitin protein ligase 2. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.768 |
ENSPMEP00000005476 | ENSPMEP00000033500 | ENSPMEP00000005476 | ENSPMEP00000033500 | Mindbomb E3 ubiquitin protein ligase 2. | Ig-like domain-containing protein. | 0.694 |
ENSPMEP00000005476 | LOC106925217 | ENSPMEP00000005476 | ENSPMEP00000019036 | Mindbomb E3 ubiquitin protein ligase 2. | Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily. | 0.835 |
ENSPMEP00000005476 | apaf1 | ENSPMEP00000005476 | ENSPMEP00000017994 | Mindbomb E3 ubiquitin protein ligase 2. | Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. | 0.512 |
ENSPMEP00000005476 | birc6 | ENSPMEP00000005476 | ENSPMEP00000032852 | Mindbomb E3 ubiquitin protein ligase 2. | Baculoviral IAP repeat containing 6. | 0.768 |
ENSPMEP00000005476 | ripk4 | ENSPMEP00000005476 | ENSPMEP00000029045 | Mindbomb E3 ubiquitin protein ligase 2. | Receptor-interacting serine-threonine kinase 4. | 0.835 |
ENSPMEP00000005476 | tradd | ENSPMEP00000005476 | ENSPMEP00000019501 | Mindbomb E3 ubiquitin protein ligase 2. | Tnfrsf1a-associated via death domain. | 0.991 |
ENSPMEP00000018093 | ENSPMEP00000005476 | ENSPMEP00000018093 | ENSPMEP00000005476 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Mindbomb E3 ubiquitin protein ligase 2. | 0.768 |
ENSPMEP00000018093 | ENSPMEP00000033500 | ENSPMEP00000018093 | ENSPMEP00000033500 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ig-like domain-containing protein. | 0.773 |
ENSPMEP00000018093 | LOC106925217 | ENSPMEP00000018093 | ENSPMEP00000019036 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily. | 0.890 |
ENSPMEP00000018093 | apaf1 | ENSPMEP00000018093 | ENSPMEP00000017994 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. | 0.870 |
ENSPMEP00000018093 | appl1 | ENSPMEP00000018093 | ENSPMEP00000005712 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1. | 0.595 |
ENSPMEP00000018093 | appl2 | ENSPMEP00000018093 | ENSPMEP00000031432 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2. | 0.595 |
ENSPMEP00000018093 | birc6 | ENSPMEP00000018093 | ENSPMEP00000032852 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Baculoviral IAP repeat containing 6. | 0.938 |
ENSPMEP00000018093 | ripk4 | ENSPMEP00000018093 | ENSPMEP00000029045 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Receptor-interacting serine-threonine kinase 4. | 0.890 |
ENSPMEP00000018093 | tradd | ENSPMEP00000018093 | ENSPMEP00000019501 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Tnfrsf1a-associated via death domain. | 0.846 |
ENSPMEP00000033500 | ENSPMEP00000005476 | ENSPMEP00000033500 | ENSPMEP00000005476 | Ig-like domain-containing protein. | Mindbomb E3 ubiquitin protein ligase 2. | 0.694 |
ENSPMEP00000033500 | ENSPMEP00000018093 | ENSPMEP00000033500 | ENSPMEP00000018093 | Ig-like domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.773 |
ENSPMEP00000033500 | LOC106925217 | ENSPMEP00000033500 | ENSPMEP00000019036 | Ig-like domain-containing protein. | Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily. | 0.619 |
ENSPMEP00000033500 | apaf1 | ENSPMEP00000033500 | ENSPMEP00000017994 | Ig-like domain-containing protein. | Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. | 0.815 |
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