STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106924529Mucolipin 3a. (531 aa)    
Predicted Functional Partners:
mcoln1
Mucolipin 1b.
  
  
 
0.898
LOC106911702
Mucolipin 1a.
  
  
 
0.898
MCOLN3
Mucolipin 3.
  
  
 
0.716
mcoln2
Mucolipin 2.
  
  
 
0.676
ENSPMEP00000006022
Uncharacterized protein.
     
 0.614
ENSPMEP00000012896
Ion_trans domain-containing protein.
     
 0.614
ENSPMEP00000013041
Uncharacterized protein.
     
 0.614
LOC106910456
Transient receptor potential cation channel, subfamily M, member 2.
     
 0.614
ENSPMEP00000029330
LSDAT_euk domain-containing protein.
     
 0.614
ENSPMEP00000029347
LSDAT_euk domain-containing protein.
     
 0.614
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.