Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ocin01_01440 | Ocin01_01810 | A0A1D2NIZ6 | A0A1D2NHT3 | Protein LTV1. | Pre-rRNA-processing protein TSR1. | 0.999 |
Ocin01_01440 | Ocin01_02088 | A0A1D2NIZ6 | A0A1D2NH48 | Protein LTV1. | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | 0.999 |
Ocin01_01440 | Ocin01_02373 | A0A1D2NIZ6 | A0A1D2NGB7 | Protein LTV1. | Protein AATF. | 0.890 |
Ocin01_01440 | Ocin01_03119 | A0A1D2NIZ6 | A0A1D2NE86 | Protein LTV1. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.995 |
Ocin01_01440 | Ocin01_04171 | A0A1D2NIZ6 | A0A1D2NB87 | Protein LTV1. | Serine/threonine-protein kinase RIO2. | 0.999 |
Ocin01_01440 | Ocin01_09815 | A0A1D2NIZ6 | A0A1D2MV57 | Protein LTV1. | U3 small nucleolar ribonucleoprotein IMP4. | 0.902 |
Ocin01_01440 | Ocin01_11794 | A0A1D2NIZ6 | A0A1D2MPC9 | Protein LTV1. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.892 |
Ocin01_01440 | Ocin01_12076 | A0A1D2NIZ6 | A0A1D2MNL3 | Protein LTV1. | Bystin. | 0.999 |
Ocin01_01440 | Ocin01_13061 | A0A1D2NIZ6 | A0A1D2MKT9 | Protein LTV1. | U3 small nucleolar ribonucleoprotein IMP3. | 0.996 |
Ocin01_01440 | Ocin01_20194 | A0A1D2NIZ6 | A0A1D2M0J5 | Protein LTV1. | RNA-binding protein PNO1. | 0.963 |
Ocin01_01810 | Ocin01_01440 | A0A1D2NHT3 | A0A1D2NIZ6 | Pre-rRNA-processing protein TSR1. | Protein LTV1. | 0.999 |
Ocin01_01810 | Ocin01_02088 | A0A1D2NHT3 | A0A1D2NH48 | Pre-rRNA-processing protein TSR1. | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | 0.999 |
Ocin01_01810 | Ocin01_02373 | A0A1D2NHT3 | A0A1D2NGB7 | Pre-rRNA-processing protein TSR1. | Protein AATF. | 0.895 |
Ocin01_01810 | Ocin01_03119 | A0A1D2NHT3 | A0A1D2NE86 | Pre-rRNA-processing protein TSR1. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.993 |
Ocin01_01810 | Ocin01_04171 | A0A1D2NHT3 | A0A1D2NB87 | Pre-rRNA-processing protein TSR1. | Serine/threonine-protein kinase RIO2. | 0.999 |
Ocin01_01810 | Ocin01_09815 | A0A1D2NHT3 | A0A1D2MV57 | Pre-rRNA-processing protein TSR1. | U3 small nucleolar ribonucleoprotein IMP4. | 0.912 |
Ocin01_01810 | Ocin01_11794 | A0A1D2NHT3 | A0A1D2MPC9 | Pre-rRNA-processing protein TSR1. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.840 |
Ocin01_01810 | Ocin01_12076 | A0A1D2NHT3 | A0A1D2MNL3 | Pre-rRNA-processing protein TSR1. | Bystin. | 0.999 |
Ocin01_01810 | Ocin01_13061 | A0A1D2NHT3 | A0A1D2MKT9 | Pre-rRNA-processing protein TSR1. | U3 small nucleolar ribonucleoprotein IMP3. | 0.994 |
Ocin01_01810 | Ocin01_20194 | A0A1D2NHT3 | A0A1D2M0J5 | Pre-rRNA-processing protein TSR1. | RNA-binding protein PNO1. | 0.971 |
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