STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_20022Histone H3.2. (136 aa)    
Predicted Functional Partners:
Ocin01_05911
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.882
Ocin01_02087
Lysine-specific demethylase 6A.
   
 0.858
Ocin01_07776
JmjC domain-containing histone demethylation protein 1.
    
 0.829
Ocin01_13450
Histone H2A; Belongs to the histone H2A family.
   
 0.818
Ocin01_06239
Putative histone-binding protein lin-53.
   
 0.802
Ocin01_10498
Uncharacterized protein.
    
 0.797
Ocin01_08324
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
   
 0.796
Ocin01_11239
THAP domain-containing protein 1.
   
 0.794
Ocin01_06757
PHD finger protein 20-like protein 1.
   
 0.794
Ocin01_08008
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.790
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.