STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_19592Putative nuclease HARBI1. (347 aa)    
Predicted Functional Partners:
Ocin01_00030
Tyrosine-protein kinase-like otk; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.785
Ocin01_19380
Sortilin-related receptor.
    
 0.688
Ocin01_16267
Sortilin-related receptor.
    
 0.688
Ocin01_12898
Sortilin-related receptor.
    
 0.688
Ocin01_11764
Sortilin-related receptor.
    
 0.688
Ocin01_07831
Sortilin-related receptor.
    
 0.688
Ocin01_07830
Sortilin-related receptor.
    
 0.688
Ocin01_12208
60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
   
 
  0.528
Ocin01_12903
Muscle M-line assembly protein unc-89.
    
  0.502
Ocin01_12902
Twitchin.
    
  0.502
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
Server load: low (28%) [HD]