Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ocin01_00353 | Ocin01_03478 | A0A1D2NM60 | A0A1D2ND51 | Nucleoporin GLE1. | Peptidyl-prolyl cis-trans isomerase. | 0.982 |
Ocin01_00353 | Ocin01_19565 | A0A1D2NM60 | A0A1D2M2C4 | Nucleoporin GLE1. | Uncharacterized protein. | 0.781 |
Ocin01_02708 | Ocin01_03321 | A0A1D2NFE4 | A0A1D2NDM9 | 40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. | 40S ribosomal protein S28. | 0.999 |
Ocin01_02708 | Ocin01_07802 | A0A1D2NFE4 | A0A1D2N0R3 | 40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. | Ubiquitin-like domain-containing protein. | 0.903 |
Ocin01_02708 | Ocin01_11917 | A0A1D2NFE4 | A0A1D2MPQ9 | 40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. | 40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. | 0.999 |
Ocin01_02708 | Ocin01_18330 | A0A1D2NFE4 | A0A1D2M604 | 40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. | 40S ribosomal protein S19. | 0.999 |
Ocin01_02708 | Ocin01_19565 | A0A1D2NFE4 | A0A1D2M2C4 | 40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. | Uncharacterized protein. | 0.617 |
Ocin01_03321 | Ocin01_02708 | A0A1D2NDM9 | A0A1D2NFE4 | 40S ribosomal protein S28. | 40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.999 |
Ocin01_03321 | Ocin01_03478 | A0A1D2NDM9 | A0A1D2ND51 | 40S ribosomal protein S28. | Peptidyl-prolyl cis-trans isomerase. | 0.516 |
Ocin01_03321 | Ocin01_07802 | A0A1D2NDM9 | A0A1D2N0R3 | 40S ribosomal protein S28. | Ubiquitin-like domain-containing protein. | 0.892 |
Ocin01_03321 | Ocin01_11917 | A0A1D2NDM9 | A0A1D2MPQ9 | 40S ribosomal protein S28. | 40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. | 0.999 |
Ocin01_03321 | Ocin01_18330 | A0A1D2NDM9 | A0A1D2M604 | 40S ribosomal protein S28. | 40S ribosomal protein S19. | 0.999 |
Ocin01_03321 | Ocin01_19565 | A0A1D2NDM9 | A0A1D2M2C4 | 40S ribosomal protein S28. | Uncharacterized protein. | 0.619 |
Ocin01_03478 | Ocin01_00353 | A0A1D2ND51 | A0A1D2NM60 | Peptidyl-prolyl cis-trans isomerase. | Nucleoporin GLE1. | 0.982 |
Ocin01_03478 | Ocin01_03321 | A0A1D2ND51 | A0A1D2NDM9 | Peptidyl-prolyl cis-trans isomerase. | 40S ribosomal protein S28. | 0.516 |
Ocin01_03478 | Ocin01_05911 | A0A1D2ND51 | A0A1D2N738 | Peptidyl-prolyl cis-trans isomerase. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.990 |
Ocin01_03478 | Ocin01_15018 | A0A1D2ND51 | A0A1D2MFJ5 | Peptidyl-prolyl cis-trans isomerase. | Vitrin. | 0.662 |
Ocin01_03478 | Ocin01_18330 | A0A1D2ND51 | A0A1D2M604 | Peptidyl-prolyl cis-trans isomerase. | 40S ribosomal protein S19. | 0.544 |
Ocin01_03478 | Ocin01_19565 | A0A1D2ND51 | A0A1D2M2C4 | Peptidyl-prolyl cis-trans isomerase. | Uncharacterized protein. | 0.649 |
Ocin01_05911 | Ocin01_03478 | A0A1D2N738 | A0A1D2ND51 | Leucine-rich repeat serine/threonine-protein kinase 1. | Peptidyl-prolyl cis-trans isomerase. | 0.990 |
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