STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_19152TBC1 domain family member 1. (701 aa)    
Predicted Functional Partners:
Ocin01_12234
Ras-related protein Rab-11B.
    
 0.798
Ocin01_08764
Non-specific serine/threonine protein kinase.
    
 0.757
Ocin01_02502
Rab-like protein 2A.
    
 0.726
Ocin01_20038
Ras-related protein Rab-14.
    
 0.688
Ocin01_20037
Ras-related protein Rab-14.
    
 0.688
Ocin01_07112
Ras-related protein Rab-14.
    
 0.688
Ocin01_11274
Ras-related protein Rab-2A.
    
 0.656
Ocin01_01288
GTP-binding protein YPTC4.
    
 0.656
Ocin01_01287
GTP-binding protein yptV4.
    
 0.656
Ocin01_15452
Ras-related protein Rab-10.
    
 0.640
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.