Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ocin01_01531 | Ocin01_05476 | A0A1D2NIU1 | A0A1D2N7H5 | Kalirin. | Uncharacterized protein. | 0.614 |
Ocin01_01531 | Ocin01_05911 | A0A1D2NIU1 | A0A1D2N738 | Kalirin. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.935 |
Ocin01_01531 | Ocin01_05954 | A0A1D2NIU1 | A0A1D2N624 | Kalirin. | E3 ubiquitin-protein ligase MIB2. | 0.486 |
Ocin01_01531 | Ocin01_08149 | A0A1D2NIU1 | A0A1D2N0T7 | Kalirin. | Dual specificity mitogen-activated protein kinase kinase dSOR1. | 0.636 |
Ocin01_01531 | Ocin01_18940 | A0A1D2NIU1 | A0A1D2M499 | Kalirin. | Serine/threonine-protein kinase/endoribonuclease IRE1. | 0.723 |
Ocin01_01916 | Ocin01_05911 | A0A1D2NI42 | A0A1D2N738 | Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.821 |
Ocin01_01916 | Ocin01_18940 | A0A1D2NI42 | A0A1D2M499 | Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family. | Serine/threonine-protein kinase/endoribonuclease IRE1. | 0.756 |
Ocin01_05476 | Ocin01_01531 | A0A1D2N7H5 | A0A1D2NIU1 | Uncharacterized protein. | Kalirin. | 0.614 |
Ocin01_05476 | Ocin01_05911 | A0A1D2N7H5 | A0A1D2N738 | Uncharacterized protein. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.999 |
Ocin01_05476 | Ocin01_05954 | A0A1D2N7H5 | A0A1D2N624 | Uncharacterized protein. | E3 ubiquitin-protein ligase MIB2. | 0.617 |
Ocin01_05476 | Ocin01_13704 | A0A1D2N7H5 | A0A1D2MIX3 | Uncharacterized protein. | Regulator of G-protein signaling loco. | 0.514 |
Ocin01_05476 | Ocin01_18940 | A0A1D2N7H5 | A0A1D2M499 | Uncharacterized protein. | Serine/threonine-protein kinase/endoribonuclease IRE1. | 0.910 |
Ocin01_05911 | Ocin01_01531 | A0A1D2N738 | A0A1D2NIU1 | Leucine-rich repeat serine/threonine-protein kinase 1. | Kalirin. | 0.935 |
Ocin01_05911 | Ocin01_01916 | A0A1D2N738 | A0A1D2NI42 | Leucine-rich repeat serine/threonine-protein kinase 1. | Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family. | 0.821 |
Ocin01_05911 | Ocin01_05476 | A0A1D2N738 | A0A1D2N7H5 | Leucine-rich repeat serine/threonine-protein kinase 1. | Uncharacterized protein. | 0.999 |
Ocin01_05911 | Ocin01_05954 | A0A1D2N738 | A0A1D2N624 | Leucine-rich repeat serine/threonine-protein kinase 1. | E3 ubiquitin-protein ligase MIB2. | 0.993 |
Ocin01_05911 | Ocin01_08149 | A0A1D2N738 | A0A1D2N0T7 | Leucine-rich repeat serine/threonine-protein kinase 1. | Dual specificity mitogen-activated protein kinase kinase dSOR1. | 0.852 |
Ocin01_05911 | Ocin01_11621 | A0A1D2N738 | A0A1D2MQ78 | Leucine-rich repeat serine/threonine-protein kinase 1. | Muscle M-line assembly protein unc-89. | 0.998 |
Ocin01_05911 | Ocin01_13704 | A0A1D2N738 | A0A1D2MIX3 | Leucine-rich repeat serine/threonine-protein kinase 1. | Regulator of G-protein signaling loco. | 0.999 |
Ocin01_05911 | Ocin01_16162 | A0A1D2N738 | A0A1D2MC52 | Leucine-rich repeat serine/threonine-protein kinase 1. | Heat shock 70 kDa protein cognate 3. | 0.821 |
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