STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_18846Spectrin alpha chain. (143 aa)    
Predicted Functional Partners:
Ocin01_16198
Spectrin alpha chain.
 
     0.937
Ocin01_16163
Spectrin alpha chain.
 
     0.930
Ocin01_13316
Spectrin beta chain.
 
 
 0.924
Ocin01_10407
Spectrin beta chain, non-erythrocytic 1.
 
 
 0.888
Ocin01_13202
Spectrin beta chain.
   
 0.864
Ocin01_19725
Spectrin alpha chain, non-erythrocytic 1.
   
 0.846
Ocin01_04971
Plectin.
   
  0.667
Ocin01_04972
Dystonin.
   
  0.667
Ocin01_04973
Microtubule-actin cross-linking factor 1.
   
  0.667
Ocin01_04974
Uncharacterized protein.
   
  0.667
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.