Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ocin01_00414 | Ocin01_02087 | A0A1D2NM17 | A0A1D2NH25 | Parafibromin. | Lysine-specific demethylase 6A. | 0.846 |
Ocin01_00414 | Ocin01_02637 | A0A1D2NM17 | A0A1D2NGB2 | Parafibromin. | DNA-directed RNA polymerases I, II, and III subunit RPABC1. | 0.980 |
Ocin01_00414 | Ocin01_02776 | A0A1D2NM17 | A0A1D2NFM1 | Parafibromin. | DNA-directed RNA polymerase II subunit RPB3. | 0.985 |
Ocin01_00414 | Ocin01_03956 | A0A1D2NM17 | A0A1D2NBW7 | Parafibromin. | Another transcription unit protein. | 0.999 |
Ocin01_00414 | Ocin01_09766 | A0A1D2NM17 | A0A1D2MV40 | Parafibromin. | DNA-directed RNA polymerase II subunit RPB4. | 0.973 |
Ocin01_00414 | Ocin01_13450 | A0A1D2NM17 | A0A1D2MK09 | Parafibromin. | Histone H2A; Belongs to the histone H2A family. | 0.711 |
Ocin01_00414 | Ocin01_14798 | A0A1D2NM17 | A0A1D2MG47 | Parafibromin. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.976 |
Ocin01_00414 | Ocin01_18582 | A0A1D2NM17 | A0A1D2M541 | Parafibromin. | Histone H2B. | 0.773 |
Ocin01_02087 | Ocin01_00414 | A0A1D2NH25 | A0A1D2NM17 | Lysine-specific demethylase 6A. | Parafibromin. | 0.846 |
Ocin01_02087 | Ocin01_02507 | A0A1D2NH25 | A0A1D2NFW3 | Lysine-specific demethylase 6A. | BRCA1-associated RING domain protein 1. | 0.617 |
Ocin01_02087 | Ocin01_02637 | A0A1D2NH25 | A0A1D2NGB2 | Lysine-specific demethylase 6A. | DNA-directed RNA polymerases I, II, and III subunit RPABC1. | 0.811 |
Ocin01_02087 | Ocin01_02776 | A0A1D2NH25 | A0A1D2NFM1 | Lysine-specific demethylase 6A. | DNA-directed RNA polymerase II subunit RPB3. | 0.940 |
Ocin01_02087 | Ocin01_03956 | A0A1D2NH25 | A0A1D2NBW7 | Lysine-specific demethylase 6A. | Another transcription unit protein. | 0.822 |
Ocin01_02087 | Ocin01_06239 | A0A1D2NH25 | A0A1D2N687 | Lysine-specific demethylase 6A. | Putative histone-binding protein lin-53. | 0.943 |
Ocin01_02087 | Ocin01_09766 | A0A1D2NH25 | A0A1D2MV40 | Lysine-specific demethylase 6A. | DNA-directed RNA polymerase II subunit RPB4. | 0.771 |
Ocin01_02087 | Ocin01_13450 | A0A1D2NH25 | A0A1D2MK09 | Lysine-specific demethylase 6A. | Histone H2A; Belongs to the histone H2A family. | 0.969 |
Ocin01_02087 | Ocin01_14798 | A0A1D2NH25 | A0A1D2MG47 | Lysine-specific demethylase 6A. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.702 |
Ocin01_02087 | Ocin01_18582 | A0A1D2NH25 | A0A1D2M541 | Lysine-specific demethylase 6A. | Histone H2B. | 0.788 |
Ocin01_02507 | Ocin01_02087 | A0A1D2NFW3 | A0A1D2NH25 | BRCA1-associated RING domain protein 1. | Lysine-specific demethylase 6A. | 0.617 |
Ocin01_02507 | Ocin01_06239 | A0A1D2NFW3 | A0A1D2N687 | BRCA1-associated RING domain protein 1. | Putative histone-binding protein lin-53. | 0.456 |
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