STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_18321Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial. (182 aa)    
Predicted Functional Partners:
Ocin01_06041
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.863
Ocin01_03256
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.824
Ocin01_03934
3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic.
  
 
 0.819
Ocin01_10255
Lambda-crystallin.
  
 
 0.759
Ocin01_03583
Uncharacterized protein.
  
 
 0.759
Ocin01_03907
Trifunctional enzyme subunit beta, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.758
Ocin01_11649
Acetyl-CoA acetyltransferase, cytosolic; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.750
Ocin01_01411
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
    
 0.750
Ocin01_10287
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 0.744
Ocin01_18244
3-ketoacyl-CoA thiolase, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.726
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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