STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_18006Receptor-type tyrosine-protein phosphatase kappa. (512 aa)    
Predicted Functional Partners:
Ocin01_05911
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.895
Ocin01_00030
Tyrosine-protein kinase-like otk; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.868
Ocin01_03339
Armadillo segment polarity protein.
    
 0.839
Ocin01_05267
Tyrosine-protein kinase transmembrane receptor ROR1.
    
 0.807
Ocin01_15190
Mitogen-activated protein kinase 15.
    
 0.803
Ocin01_10203
Mitogen-activated protein kinase.
    
 0.803
Ocin01_01454
Putative serine/threonine-protein kinase C05D10.2.
    
 0.803
Ocin01_09250
Unconventional myosin-IXa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.793
Ocin01_07380
Unconventional myosin-IXa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.793
Ocin01_05444
Catenin delta-2.
   
 0.790
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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