STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_17558UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (179 aa)    
Predicted Functional Partners:
Ocin01_07802
Ubiquitin-like domain-containing protein.
   
 0.965
Ocin01_08148
Uncharacterized protein.
    
 0.964
Ocin01_17592
RING-box protein 1A.
    
 0.963
Ocin01_02791
NEDD8-activating enzyme E1 regulatory subunit.
    
 0.958
Ocin01_04814
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
    
 0.903
Ocin01_11281
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
    
 0.893
Ocin01_15966
RING-box protein 2.
    
 0.892
Ocin01_15149
Ubiquitin-like modifier-activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
    
 0.887
Ocin01_08633
Cullin-3; Belongs to the cullin family.
    
 0.884
Ocin01_01784
Cullin-1; Belongs to the cullin family.
    
 0.870
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.