STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_17269Sialin. (577 aa)    
Predicted Functional Partners:
Ocin01_06356
Regulating synaptic membrane exocytosis protein 2.
     
 0.819
Ocin01_14048
Vesicular inhibitory amino acid transporter.
     
 0.659
Ocin01_05924
Vesicular acetylcholine transporter.
     
 0.656
Ocin01_11000
Synaptic vesicular amine transporter.
     
 0.602
Ocin01_02537
Synaptoporin.
     
 0.595
Ocin01_11338
Synapsin.
    
 0.585
Ocin01_12882
Synaptotagmin 1.
   
 
 0.579
Ocin01_00614
Synaptotagmin 1.
   
 
 0.579
Ocin01_13862
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.561
Ocin01_09222
Synaptosomal-associated protein 25.
    
 0.561
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.