Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_16584Poly(ADP-ribose) polymerase pme-1. (450 aa)    
Predicted Functional Partners:
Ocin01_03401
Poly(ADP-ribose) glycohydrolase.
    
 0.884
Ocin01_13697
Poly [ADP-ribose] polymerase.
    
 0.866
Ocin01_03177
Replication factor C subunit 4.
   
  0.863
Ocin01_05132
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.857
Ocin01_04964
Replication factor C subunit 5.
   
  0.855
Ocin01_05885
Replication factor C subunit 2.
   
  0.852
Ocin01_04899
Replication factor C subunit 3.
   
  0.846
Ocin01_02611
Breast cancer type 2 susceptibility protein.
    
 0.823
Ocin01_15885
Replication protein A 32 kDa subunit.
    
 0.812
Ocin01_04354
DNA repair protein.
    
 0.809
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
Server load: low (16%) [HD]