STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_16129Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (238 aa)    
Predicted Functional Partners:
Ocin01_06421
Myotubularin-related protein 3.
     
 0.832
Ocin01_00597
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha.
     
 0.803
Ocin01_12536
Myotubularin-related protein 2.
     
 0.801
Ocin01_10088
1-phosphatidylinositol 3-phosphate 5-kinase.
     
 0.788
Ocin01_14990
Uncharacterized protein.
     
 0.703
Ocin01_04480
Uncharacterized protein.
     
 0.703
Ocin01_02638
Uncharacterized protein.
     
 0.703
Ocin01_02220
Myotubularin-related protein 10.
     
 0.703
Ocin01_18757
Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha.
     
 0.680
Ocin01_17581
Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha.
     
 0.680
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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