STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_16047Heterogeneous nuclear ribonucleoprotein K. (91 aa)    
Predicted Functional Partners:
Ocin01_09897
Myelin expression factor 2.
   
 0.979
Ocin01_16766
Heterogeneous nuclear ribonucleoprotein A1, A2/B1.
   
 0.965
Ocin01_16791
Desumoylating isopeptidase 1.
    
   0.944
Ocin01_01900
Uncharacterized protein.
    
   0.944
Ocin01_09754
Heterogeneous nuclear ribonucleoprotein L.
   
 0.920
Ocin01_08497
TAR DNA-binding protein 43.
   
 0.915
Ocin01_18290
Heterogeneous nuclear ribonucleoprotein U-like protein 1.
   
 0.910
Ocin01_18289
Heterogeneous nuclear ribonucleoprotein U-like protein 1.
   
 0.910
Ocin01_08746
Mediator of RNA polymerase II transcription subunit 26.
   
  0.897
Ocin01_07234
RNA-binding protein 1.
   
 0.891
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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