Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ocin01_01900 | Ocin01_16047 | A0A1D2NHR4 | A0A1D2MCD4 | Uncharacterized protein. | Heterogeneous nuclear ribonucleoprotein K. | 0.944 |
Ocin01_07234 | Ocin01_08497 | A0A1D2N2J0 | A0A1D2MYP4 | RNA-binding protein 1. | TAR DNA-binding protein 43. | 0.827 |
Ocin01_07234 | Ocin01_09754 | A0A1D2N2J0 | A0A1D2MVA6 | RNA-binding protein 1. | Heterogeneous nuclear ribonucleoprotein L. | 0.779 |
Ocin01_07234 | Ocin01_09897 | A0A1D2N2J0 | A0A1D2MV34 | RNA-binding protein 1. | Myelin expression factor 2. | 0.910 |
Ocin01_07234 | Ocin01_16047 | A0A1D2N2J0 | A0A1D2MCD4 | RNA-binding protein 1. | Heterogeneous nuclear ribonucleoprotein K. | 0.891 |
Ocin01_07234 | Ocin01_16766 | A0A1D2N2J0 | A0A1D2MAA5 | RNA-binding protein 1. | Heterogeneous nuclear ribonucleoprotein A1, A2/B1. | 0.900 |
Ocin01_07234 | Ocin01_18289 | A0A1D2N2J0 | A0A1D2M650 | RNA-binding protein 1. | Heterogeneous nuclear ribonucleoprotein U-like protein 1. | 0.694 |
Ocin01_07234 | Ocin01_18290 | A0A1D2N2J0 | A0A1D2M645 | RNA-binding protein 1. | Heterogeneous nuclear ribonucleoprotein U-like protein 1. | 0.694 |
Ocin01_08497 | Ocin01_07234 | A0A1D2MYP4 | A0A1D2N2J0 | TAR DNA-binding protein 43. | RNA-binding protein 1. | 0.827 |
Ocin01_08497 | Ocin01_08746 | A0A1D2MYP4 | A0A1D2MXZ7 | TAR DNA-binding protein 43. | Mediator of RNA polymerase II transcription subunit 26. | 0.601 |
Ocin01_08497 | Ocin01_09754 | A0A1D2MYP4 | A0A1D2MVA6 | TAR DNA-binding protein 43. | Heterogeneous nuclear ribonucleoprotein L. | 0.737 |
Ocin01_08497 | Ocin01_09897 | A0A1D2MYP4 | A0A1D2MV34 | TAR DNA-binding protein 43. | Myelin expression factor 2. | 0.911 |
Ocin01_08497 | Ocin01_16047 | A0A1D2MYP4 | A0A1D2MCD4 | TAR DNA-binding protein 43. | Heterogeneous nuclear ribonucleoprotein K. | 0.915 |
Ocin01_08497 | Ocin01_16766 | A0A1D2MYP4 | A0A1D2MAA5 | TAR DNA-binding protein 43. | Heterogeneous nuclear ribonucleoprotein A1, A2/B1. | 0.768 |
Ocin01_08497 | Ocin01_18289 | A0A1D2MYP4 | A0A1D2M650 | TAR DNA-binding protein 43. | Heterogeneous nuclear ribonucleoprotein U-like protein 1. | 0.703 |
Ocin01_08497 | Ocin01_18290 | A0A1D2MYP4 | A0A1D2M645 | TAR DNA-binding protein 43. | Heterogeneous nuclear ribonucleoprotein U-like protein 1. | 0.703 |
Ocin01_08746 | Ocin01_08497 | A0A1D2MXZ7 | A0A1D2MYP4 | Mediator of RNA polymerase II transcription subunit 26. | TAR DNA-binding protein 43. | 0.601 |
Ocin01_08746 | Ocin01_09897 | A0A1D2MXZ7 | A0A1D2MV34 | Mediator of RNA polymerase II transcription subunit 26. | Myelin expression factor 2. | 0.605 |
Ocin01_08746 | Ocin01_16047 | A0A1D2MXZ7 | A0A1D2MCD4 | Mediator of RNA polymerase II transcription subunit 26. | Heterogeneous nuclear ribonucleoprotein K. | 0.897 |
Ocin01_08746 | Ocin01_16766 | A0A1D2MXZ7 | A0A1D2MAA5 | Mediator of RNA polymerase II transcription subunit 26. | Heterogeneous nuclear ribonucleoprotein A1, A2/B1. | 0.601 |
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