STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_15970Tyrosine-protein phosphatase non-receptor type 23. (2004 aa)    
Predicted Functional Partners:
Ocin01_02452
Charged multivesicular body protein 4b.
    
 0.994
Ocin01_13820
Charged multivesicular body protein 4b.
    
 0.993
Ocin01_12038
Signal transducing adapter molecule 1.
   
 0.986
Ocin01_17489
Protein E(Sev)2B.
   
 0.966
Ocin01_05696
Protein E(Sev)2B.
   
 0.966
Ocin01_06332
Magnesium-dependent phosphatase 1.
    
 0.955
Ocin01_05457
Magnesium-dependent phosphatase 1.
    
 0.955
Ocin01_13089
Receptor protein-tyrosine kinase.
    
 0.942
Ocin01_05911
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.921
Ocin01_13240
Fibroblast growth factor receptor 3.
   
 0.896
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.