STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_15926Rho crystallin. (202 aa)    
Predicted Functional Partners:
Ocin01_05163
Glutamate--cysteine ligase catalytic subunit.
    
 0.819
Ocin01_14554
Glyoxylate reductase/hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.734
Ocin01_02938
Sorbitol dehydrogenase.
  
 0.725
Ocin01_08385
L-galactose dehydrogenase.
  
 0.718
Ocin01_18195
Voltage-gated potassium channel subunit beta-1.
  
 0.697
Ocin01_15707
Voltage-gated potassium channel subunit beta-3.
  
 0.697
Ocin01_03243
Voltage-gated potassium channel subunit beta-1.
  
 0.697
Ocin01_01426
Glutathione synthetase.
   
 0.678
Ocin01_06481
Uncharacterized protein.
  
 
 0.663
Ocin01_02642
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 0.663
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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