STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_15897Putative zinc finger protein. (396 aa)    
Predicted Functional Partners:
Ocin01_05911
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.778
Ocin01_05476
Uncharacterized protein.
    
  0.755
Ocin01_02507
BRCA1-associated RING domain protein 1.
    
 0.648
Ocin01_05432
Adenylate kinase 9.
    
  0.624
Ocin01_05431
Adenylate kinase 9.
    
  0.624
Ocin01_11907
General transcription factor 3C polypeptide 3.
    
 0.623
Ocin01_02087
Lysine-specific demethylase 6A.
    
 0.608
Ocin01_08907
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
    
  0.598
Ocin01_16018
Ragulator complex protein LAMTOR2.
    
  0.596
Ocin01_00499
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.588
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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