STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_15859Putative leucine aminopeptidase. (393 aa)    
Predicted Functional Partners:
Ocin01_01851
Cyclin-G-associated kinase.
    
  0.717
Ocin01_05911
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.610
Ocin01_13089
Receptor protein-tyrosine kinase.
    
  0.596
Ocin01_03307
Ephrin type-A receptor 5; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.560
Ocin01_06065
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.557
Ocin01_02324
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
     
 0.551
Ocin01_00057
Phospholipase D1.
    
 0.543
Ocin01_02613
Citron Rho-interacting kinase.
    
  0.542
Ocin01_07751
Katanin p60 ATPase-containing subunit A-like 2; Belongs to the AAA ATPase family.
   
 
 0.539
Ocin01_05142
Serine hydroxymethyltransferase, mitochondrial.
     
 0.536
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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