STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_15675Uncharacterized protein. (54 aa)    
Predicted Functional Partners:
Ocin01_11918
COP9 signalosome complex subunit 5.
   
 
 0.665
Ocin01_12761
COP9 signalosome complex subunit 6.
    
 
 0.662
Ocin01_07723
COP9 signalosome complex subunit 8.
    
 
 0.658
Ocin01_01988
Cytochrome b-c1 complex subunit 9.
   
    0.643
Ocin01_06228
COP9 signalosome complex subunit 1.
    
   0.621
Ocin01_13521
COP9 signalosome complex subunit 2.
    
 
 0.551
Ocin01_03729
Protein phosphatase 1 regulatory subunit 42.
   
 
 0.551
Ocin01_20219
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
   
    0.479
Ocin01_02083
Cullin-4B; Belongs to the cullin family.
    
   0.459
Ocin01_04582
Ubiquitin-like protein 5.
   
    0.447
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.