STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_15523SPRY domain-containing SOCS box protein 4. (145 aa)    
Predicted Functional Partners:
Ocin01_03115
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.967
Ocin01_19404
Cullin-5; Belongs to the cullin family.
    
 0.820
Ocin01_18943
Cullin-5; Belongs to the cullin family.
    
 0.820
Ocin01_15627
Transcription elongation factor B polypeptide 2.
    
 0.735
Ocin01_01784
Cullin-1; Belongs to the cullin family.
   
 0.711
Ocin01_01785
Cullin-1; Belongs to the cullin family.
   
 0.711
Ocin01_08633
Cullin-3; Belongs to the cullin family.
   
 0.707
Ocin01_15966
RING-box protein 2.
    
 0.701
Ocin01_04202
E3 ubiquitin-protein ligase MYCBP2.
    
 
 0.685
Ocin01_04203
E3 ubiquitin-protein ligase MYCBP2.
    
 
 0.685
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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