STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_15142Kelch domain-containing protein 3. (425 aa)    
Predicted Functional Partners:
Ocin01_15627
Transcription elongation factor B polypeptide 2.
    
 
 0.856
Ocin01_11722
Cullin-2; Belongs to the cullin family.
    
 
 0.700
Ocin01_03115
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
   0.663
Ocin01_17592
RING-box protein 1A.
    
   0.493
Ocin01_12628
Zinc finger MYND domain-containing protein 10.
      
 0.474
Ocin01_09764
Neuronal PAS domain-containing protein 4.
      
 0.403
Ocin01_11551
T-complex protein 11-like protein 1.
      
 0.400
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.