STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_15221Chitin-binding type-2 domain-containing protein. (773 aa)    
Predicted Functional Partners:
Ocin01_05911
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.807
Ocin01_00353
Nucleoporin GLE1.
    
 0.781
Ocin01_08744
Histone chaperone asf1.
    
 0.755
Ocin01_11917
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.692
Ocin01_07802
Ubiquitin-like domain-containing protein.
   
  0.674
Ocin01_03478
Peptidyl-prolyl cis-trans isomerase.
   
  0.649
Ocin01_14333
Uncharacterized protein.
  
  
  0.620
Ocin01_03321
40S ribosomal protein S28.
   
   0.619
Ocin01_18330
40S ribosomal protein S19.
   
 
 0.618
Ocin01_02708
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.617
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.