STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_14487Heterochromatin protein 1. (162 aa)    
Predicted Functional Partners:
Ocin01_13450
Histone H2A; Belongs to the histone H2A family.
   
 0.686
Ocin01_19444
E3 ubiquitin-protein ligase RING2.
    
 0.685
Ocin01_15609
Lethal(3)malignant brain tumor-like protein 2.
    
 0.680
Ocin01_07581
MBT domain-containing protein 1.
    
 0.680
Ocin01_04478
Lethal(3)malignant brain tumor-like protein 2.
    
 0.680
Ocin01_03252
Lethal(3)malignant brain tumor-like protein 2.
    
 0.680
Ocin01_00350
MBT domain-containing protein 1.
    
 0.680
Ocin01_10759
YY1-associated factor 2.
    
 0.659
Ocin01_03121
Transcription factor E2F5.
   
 0.644
Ocin01_05387
Transcription factor Dp-1.
   
 0.638
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.