STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_14443Uncharacterized protein. (532 aa)    
Predicted Functional Partners:
Ocin01_03300
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.904
Ocin01_05911
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.858
Ocin01_00414
Parafibromin.
    
 0.803
Ocin01_11807
Cell division cycle protein 16.
    
 0.802
Ocin01_09395
Anaphase-promoting complex subunit 4.
    
 0.802
Ocin01_03956
Another transcription unit protein.
    
 0.802
Ocin01_01472
Anaphase-promoting complex subunit 1.
    
 0.802
Ocin01_04540
Anaphase-promoting complex subunit 5.
    
 0.801
Ocin01_05871
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
    
 0.797
Ocin01_08410
Intraflagellar transport protein 52.
    
 0.792
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.