Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MED15 | Ocin01_00670 | A0A1D2MXJ1 | A0A1D2NL32 | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.997 |
MED15 | Ocin01_10425 | A0A1D2MXJ1 | A0A1D2MT00 | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.998 |
MED15 | Ocin01_12675 | A0A1D2MXJ1 | A0A1D2MMF7 | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Sterol regulatory element-binding protein 2. | 0.834 |
MED15 | Ocin01_14266 | A0A1D2MXJ1 | A0A1D2MHJ6 | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Bacillopeptidase F. | 0.529 |
Ocin01_00670 | MED15 | A0A1D2NL32 | A0A1D2MXJ1 | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.997 |
Ocin01_00670 | Ocin01_10425 | A0A1D2NL32 | A0A1D2MT00 | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.999 |
Ocin01_00670 | Ocin01_14266 | A0A1D2NL32 | A0A1D2MHJ6 | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | Bacillopeptidase F. | 0.523 |
Ocin01_05892 | Ocin01_05911 | A0A1D2N6A7 | A0A1D2N738 | RING-type domain-containing protein. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.767 |
Ocin01_05892 | Ocin01_10796 | A0A1D2N6A7 | A0A1D2MSX1 | RING-type domain-containing protein. | Relaxin receptor 1; Belongs to the G-protein coupled receptor 1 family. | 0.871 |
Ocin01_05892 | Ocin01_14266 | A0A1D2N6A7 | A0A1D2MHJ6 | RING-type domain-containing protein. | Bacillopeptidase F. | 0.718 |
Ocin01_05911 | Ocin01_05892 | A0A1D2N738 | A0A1D2N6A7 | Leucine-rich repeat serine/threonine-protein kinase 1. | RING-type domain-containing protein. | 0.767 |
Ocin01_05911 | Ocin01_07829 | A0A1D2N738 | A0A1D2N0V3 | Leucine-rich repeat serine/threonine-protein kinase 1. | RING finger protein 11. | 0.767 |
Ocin01_05911 | Ocin01_10796 | A0A1D2N738 | A0A1D2MSX1 | Leucine-rich repeat serine/threonine-protein kinase 1. | Relaxin receptor 1; Belongs to the G-protein coupled receptor 1 family. | 0.934 |
Ocin01_05911 | Ocin01_12675 | A0A1D2N738 | A0A1D2MMF7 | Leucine-rich repeat serine/threonine-protein kinase 1. | Sterol regulatory element-binding protein 2. | 0.592 |
Ocin01_05911 | Ocin01_13229 | A0A1D2N738 | A0A1D2MKE2 | Leucine-rich repeat serine/threonine-protein kinase 1. | Alpha-galactosidase. | 0.620 |
Ocin01_05911 | Ocin01_14266 | A0A1D2N738 | A0A1D2MHJ6 | Leucine-rich repeat serine/threonine-protein kinase 1. | Bacillopeptidase F. | 0.639 |
Ocin01_05911 | Ocin01_15018 | A0A1D2N738 | A0A1D2MFJ5 | Leucine-rich repeat serine/threonine-protein kinase 1. | Vitrin. | 0.998 |
Ocin01_07829 | Ocin01_05911 | A0A1D2N0V3 | A0A1D2N738 | RING finger protein 11. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.767 |
Ocin01_07829 | Ocin01_10796 | A0A1D2N0V3 | A0A1D2MSX1 | RING finger protein 11. | Relaxin receptor 1; Belongs to the G-protein coupled receptor 1 family. | 0.871 |
Ocin01_07829 | Ocin01_14266 | A0A1D2N0V3 | A0A1D2MHJ6 | RING finger protein 11. | Bacillopeptidase F. | 0.718 |
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