STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_14055Kinesin-like protein KIF3B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (399 aa)    
Predicted Functional Partners:
Ocin01_17659
Kinesin-associated protein 3.
   
 0.964
Ocin01_00490
Kinesin-like protein KIF3A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
  
0.880
Ocin01_06721
Ubiquitin carboxyl-terminal hydrolase.
    
 0.794
Ocin01_01308
Ubiquitin carboxyl-terminal hydrolase.
    
 0.794
Ocin01_03324
WD_REPEATS_REGION domain-containing protein.
   
 0.750
Ocin01_01283
Intraflagellar transport protein 80.
    
 0.740
Ocin01_09537
Clusterin-associated protein 1.
  
  
 0.716
Ocin01_07098
Intraflagellar transport protein 74.
   
 0.683
Ocin01_00115
Ankyrin repeat family A protein 2.
    
 0.665
Ocin01_08270
Uncharacterized protein.
     
 0.663
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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