Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ocin01_00115 | Ocin01_02087 | A0A1D2NMQ7 | A0A1D2NH25 | Ankyrin repeat family A protein 2. | Lysine-specific demethylase 6A. | 0.743 |
Ocin01_00115 | Ocin01_03478 | A0A1D2NMQ7 | A0A1D2ND51 | Ankyrin repeat family A protein 2. | Peptidyl-prolyl cis-trans isomerase. | 0.859 |
Ocin01_00115 | Ocin01_05432 | A0A1D2NMQ7 | A0A1D2N7M2 | Ankyrin repeat family A protein 2. | Adenylate kinase 9. | 0.609 |
Ocin01_00115 | Ocin01_05911 | A0A1D2NMQ7 | A0A1D2N738 | Ankyrin repeat family A protein 2. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.991 |
Ocin01_00115 | Ocin01_08008 | A0A1D2NMQ7 | A0A1D2N0E0 | Ankyrin repeat family A protein 2. | Set1/Ash2 histone methyltransferase complex subunit ASH2. | 0.402 |
Ocin01_00115 | Ocin01_14010 | A0A1D2NMQ7 | A0A1D2MI75 | Ankyrin repeat family A protein 2. | Glucan endo-1,3-beta-glucosidase A1. | 0.776 |
Ocin01_01707 | Ocin01_03478 | A0A1D2NI87 | A0A1D2ND51 | Uncharacterized protein. | Peptidyl-prolyl cis-trans isomerase. | 0.999 |
Ocin01_01707 | Ocin01_14010 | A0A1D2NI87 | A0A1D2MI75 | Uncharacterized protein. | Glucan endo-1,3-beta-glucosidase A1. | 0.748 |
Ocin01_01707 | Ocin01_14918 | A0A1D2NI87 | A0A1D2MFK1 | Uncharacterized protein. | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | 0.999 |
Ocin01_02087 | Ocin01_00115 | A0A1D2NH25 | A0A1D2NMQ7 | Lysine-specific demethylase 6A. | Ankyrin repeat family A protein 2. | 0.743 |
Ocin01_02087 | Ocin01_03478 | A0A1D2NH25 | A0A1D2ND51 | Lysine-specific demethylase 6A. | Peptidyl-prolyl cis-trans isomerase. | 0.842 |
Ocin01_02087 | Ocin01_05432 | A0A1D2NH25 | A0A1D2N7M2 | Lysine-specific demethylase 6A. | Adenylate kinase 9. | 0.866 |
Ocin01_02087 | Ocin01_05911 | A0A1D2NH25 | A0A1D2N738 | Lysine-specific demethylase 6A. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.905 |
Ocin01_02087 | Ocin01_08008 | A0A1D2NH25 | A0A1D2N0E0 | Lysine-specific demethylase 6A. | Set1/Ash2 histone methyltransferase complex subunit ASH2. | 0.992 |
Ocin01_02087 | Ocin01_14010 | A0A1D2NH25 | A0A1D2MI75 | Lysine-specific demethylase 6A. | Glucan endo-1,3-beta-glucosidase A1. | 0.798 |
Ocin01_02353 | Ocin01_06356 | A0A1D2NH93 | A0A1D2N4W5 | Protein unc-79. | Regulating synaptic membrane exocytosis protein 2. | 0.719 |
Ocin01_02353 | Ocin01_14010 | A0A1D2NH93 | A0A1D2MI75 | Protein unc-79. | Glucan endo-1,3-beta-glucosidase A1. | 0.897 |
Ocin01_03478 | Ocin01_00115 | A0A1D2ND51 | A0A1D2NMQ7 | Peptidyl-prolyl cis-trans isomerase. | Ankyrin repeat family A protein 2. | 0.859 |
Ocin01_03478 | Ocin01_01707 | A0A1D2ND51 | A0A1D2NI87 | Peptidyl-prolyl cis-trans isomerase. | Uncharacterized protein. | 0.999 |
Ocin01_03478 | Ocin01_02087 | A0A1D2ND51 | A0A1D2NH25 | Peptidyl-prolyl cis-trans isomerase. | Lysine-specific demethylase 6A. | 0.842 |
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