STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_13267Bromo adjacent y domain-containing 1 protein. (1552 aa)    
Predicted Functional Partners:
Ocin01_07054
Mesoderm induction early response protein 1.
    
 
 0.685
Ocin01_12453
SAGA-associated factor 11; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.
   
    0.617
Ocin01_04205
Protein FAM60A.
    
 
 0.558
Ocin01_00632
Pyridoxal-dependent decarboxylase domain-containing protein 1.
      
 0.516
Ocin01_02073
Inhibitor of growth protein.
    
 
 0.478
Ocin01_07600
Histone deacetylase complex subunit SAP30.
    
   0.426
Ocin01_07722
N-alpha-acetyltransferase 30.
      
 0.412
Ocin01_02619
Transmembrane protein.
      
 0.412
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.